CEA/DSV/IBeB/SBVME/LEMiRE - P2TF Database - Version 2.9
 

Genomes

Species search
Taxonomy tree-browser
Organism Lineage Transcription Factor misPredicted TF protein
Aliivibrio salmonicida LFI1238 plasmid pVSAL320 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 2 0
Aliivibrio salmonicida LFI1238 plasmid pVSAL840 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 3 0
Bdellovibrio bacteriovorus HD100 Bacteria / Proteobacteria / Deltaproteobacteria / Bdellovibrionales / Bdellovibrionaceae / Bdellovibrio. / 116 0
Butyrivibrio proteoclasticus B316 Bacteria / Firmicutes / Clostridia / Clostridiales / Lachnospiraceae / Butyrivibrio. / 19 0
Butyrivibrio proteoclasticus B316 plasmid pCY186 Bacteria / Firmicutes / Clostridia / Clostridiales / Lachnospiraceae / Butyrivibrio. / 9 0
Butyrivibrio proteoclasticus B316 plasmid pCY360 Bacteria / Firmicutes / Clostridia / Clostridiales / Lachnospiraceae / Butyrivibrio. / 8 0
Desulfovibrio aespoeensis Aspo-2 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 139 0
Desulfovibrio magneticus RS-1 plasmid pDMC1 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 4 0
Desulfovibrio vulgaris DP4 plasmid pDVUL01 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 8 0
Desulfovibrio vulgaris str. Hildenborough plasmid pDV Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 8 0
Pseudovibrio sp. FO-BEG1 plasmid unnamed Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Pseudovibrio. / 38 0
Thermanaerovibrio acidaminovorans DSM 6589 Bacteria / Synergistetes / Synergistia / Synergistales / Synergistaceae / Thermanaerovibrio. / 67 0
Thermodesulfovibrio yellowstonii DSM 11347 Bacteria / Nitrospirae / Nitrospirales / Nitrospiraceae / Thermodesulfovibrio. / 59 0
Thermovibrio ammonificans HB-1 Bacteria / Aquificae / Aquificales / Desulfurobacteriaceae / Thermovibrio. / 44 0
Thermovibrio ammonificans HB-1 plasmid pTHEAM01 Bacteria / Aquificae / Aquificales / Desulfurobacteriaceae / Thermovibrio. / 2 0
Thioalkalivibrio sp. K90mix plasmid pTK9001 Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Ectothiorhodospiraceae / Thioalkalivibrio. / 5 0
Vibrio cholerae M66-2 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 71 0
Vibrio cholerae M66-2 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 139 0
Vibrio cholerae O1 str. 2010EL-1786 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 70 0
Vibrio cholerae O1 str. 2010EL-1786 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 151 0
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 73 0
Vibrio fischeri ES114 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 129 0
Vibrio fischeri ES114 plasmid pES100 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 1 0
Vibrio fischeri MJ11 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 108 0
Vibrio fischeri MJ11 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 136 0
Vibrio fischeri MJ11 plasmid pMJ100 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 3 0
Vibrio harveyi ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 150 0
Vibrio harveyi ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 175 0
Vibrio harveyi ATCC BAA-1116 plasmid pVIBHAR Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 3 0
Vibrio parahaemolyticus RIMD 2210633 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 153 0
Vibrio parahaemolyticus RIMD 2210633 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 159 0
Vibrio sp. EJY3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 182 0
Vibrio splendidus LGP32 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 138 0
Vibrio splendidus LGP32 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 160 0
Vibrio vulnificus MO6-24/O Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 139 0
Vibrio vulnificus YJ016 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 145 0
Desulfovibrio desulfuricans ND132 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 151 0
Desulfovibrio vulgaris RCH1 plasmid pDEVAL01 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 8 0
Vibrio cholerae IEC224 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 70 0
Vibrio cholerae IEC224 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 151 0
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 73 0
Desulfovibrio hydrothermalis AM13 = DSM 14728 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 107 0
Listonella anguillarum M3 plasmid unnamed Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 4 0
Desulfovibrio gigas DSM 1382 = ATCC 19364 plasmid unnamed Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 2 0
Vibrio alginolyticus NBRC 15630 = ATCC 17749 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 159 0
Vibrio campbellii ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 147 0
Vibrio campbellii ATCC BAA-1116 plasmid unnamed Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 3 0
Vibrio nigripulchritudo Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 191 0
Aliivibrio salmonicida LFI1238 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 59 1
Cellvibrio japonicus Ueda107 Bacteria / Proteobacteria / Gammaproteobacteria / Pseudomonadales / Pseudomonadaceae / Cellvibrio. / 157 1
Denitrovibrio acetiphilus DSM 12809 Bacteria / Deferribacteres / Deferribacterales / Deferribacteraceae / Denitrovibrio. / 164 1
Desulfovibrio alaskensis G20 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 138 1
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 85 1
Desulfovibrio salexigens DSM 2638 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 167 1
Thioalkalivibrio sp. K90mix Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Ectothiorhodospiraceae / Thioalkalivibrio. / 81 1
Thioalkalivibrio sulfidophilus HL-EbGr7 Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Ectothiorhodospiraceae / Thioalkalivibrio. / 127 1
Vibrio cholerae O1 biovar El Tor str. N16961 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 69 1
Vibrio cholerae O1 biovar El Tor str. N16961 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 143 1
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 157 1
Vibrio fischeri ES114 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 106 1
Vibrio sp. Ex25 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 149 1
Vibrio vulnificus CMCP6 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 152 1
Vibrio vulnificus YJ016 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 155 1
Vibrio vulnificus YJ016 plasmid pYJ016 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 2 1
Desulfovibrio vulgaris RCH1 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 128 1
Vibrio cholerae LMA3984-4 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 63 1
Bdellovibrio exovorus JSS Bacteria / Proteobacteria / Deltaproteobacteria / Bdellovibrionales / Bdellovibrionaceae / Bdellovibrio. / 102 1
Listonella anguillarum M3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 72 1
Micavibrio aeruginosavorus EPB Bacteria / Proteobacteria / Alphaproteobacteria / Micavibrio. / 71 1
Vibrio alginolyticus NBRC 15630 = ATCC 17749 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 156 1
Vibrio nigripulchritudo Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 224 1
Butyrivibrio proteoclasticus B316 Bacteria / Firmicutes / Clostridia / Clostridiales / Lachnospiraceae / Butyrivibrio. / 140 2
Desulfovibrio africanus str. Walvis Bay Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 140 2
Desulfovibrio vulgaris DP4 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 120 2
Desulfurivibrio alkaliphilus AHT2 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfobacterales / Desulfobulbaceae / Desulfurivibrio. / 90 2
Vibrio cholerae MJ-1236 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 72 2
Vibrio sp. EJY3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 177 2
Vibrio sp. Ex25 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 152 2
Vibrio vulnificus CMCP6 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 140 2
Vibrio vulnificus MO6-24/O Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 145 2
Vibrio cholerae O395 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 157 2
Vibrio parahaemolyticus BB22OP Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 147 2
Desulfovibrio magneticus RS-1 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 189 3
Vibrio furnissii NCTC 11218 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 156 3
Desulfovibrio piezophilus C1TLV30 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 143 3
Vibrio parahaemolyticus BB22OP Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 149 3
Vibrio campbellii ATCC BAA-1116 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 167 3
Desulfovibrio vulgaris str. Hildenborough Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 124 4
Desulfovibrio vulgaris str. Miyazaki F Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 151 4
Aliivibrio salmonicida LFI1238 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Aliivibrio. / 123 5
Vibrio cholerae LMA3984-4 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 122 5
Bdellovibrio bacteriovorus str. Tiberius Bacteria / Proteobacteria / Deltaproteobacteria / Bdellovibrionales / Bdellovibrionaceae / Bdellovibrio. / 129 5
Listonella anguillarum M3 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 141 5
Micavibrio aeruginosavorus ARL-13 Bacteria / Proteobacteria / Alphaproteobacteria / Micavibrio. / 71 6
Vibrio cholerae MJ-1236 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 147 6
Vibrio furnissii NCTC 11218 Bacteria / Proteobacteria / Gammaproteobacteria / Vibrionales / Vibrionaceae / Vibrio. / 174 6
Desulfovibrio gigas DSM 1382 = ATCC 19364 Bacteria / Proteobacteria / Deltaproteobacteria / Desulfovibrionales / Desulfovibrionaceae / Desulfovibrio. / 109 7
Pseudovibrio sp. FO-BEG1 Bacteria / Proteobacteria / Alphaproteobacteria / Rhodobacterales / Rhodobacteraceae / Pseudovibrio. / 363 9
Thioalkalivibrio nitratireducens DSM 14787 Bacteria / Proteobacteria / Gammaproteobacteria / Chromatiales / Ectothiorhodospiraceae / Thioalkalivibrio. / 128 10
Butyrivibrio fibrisolvens 16/4 Bacteria / Firmicutes / Clostridia / Clostridiales / Lachnospiraceae / Butyrivibrio. / 144 23


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Date : 27 April 2024, 21:15:46 - Licence CeCILL-C (EN - FR)- Copyright/Mentions legales